Phenalenyl with natural-abundance of 13C isotope

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trukhan
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Posts: 11
Joined: Sun Jan 15, 2017 12:18 am

Phenalenyl with natural-abundance of 13C isotope

Post by trukhan »

I noticed that the EPR spectra of phenalenyl radical anion with the natural abundance of 13C in the examples \isotropic\phenalenyl_manual.m and \isotropic\phenalenyl.m differ markedly.
In my opinion, it would be more correct to use this code

Code: Select all

Sys.n = [6 3 6 3 3];
in the phenalenyl.m instead of

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Sys.n = [6 3 1 1 1];
but, unfortunately EasySpin "Cannot compute isotope patterns for equivalent nuclei."

I think this problem can be solved as follows:

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Exp.mwFreq = 9.5;
Exp.CenterSweep = [339.4 8];
Exp.nPoints = 10000;
A_H = [-0.629 +0.181];
A_C = [+0.966 +0.966 +0.966 +0.966 +0.966 +0.966 -0.784 -0.784 -0.784 -0.784 -0.784 -0.784];
Sys.g = 2;
Sys.n = [6 3 1 1 1 1 1 1 1 1 1 1 1 1];
Sys.A = mt2mhz([A_H A_C]);
Sys.Nucs = '1H,1H,C,C,C,C,C,C,C,C,C,C,C,C';
Sys.lwpp = [0, 0.01];
[x,y2] = garlic(Sys,Exp);
plot(x,y2);
(warning: calculation time is about 15 sec on a 3 GHz processor)

The spectrum calculated in such a way is almost identical to the spectrum calculated by phenalenyl_manual.m example.
Moreover, in this case, one can see additional small peaks, which, in my opinion, are due to the species with more than one 13C.
Is it right? Any comments?
Stefan Stoll
EasySpin Creator
Posts: 1073
Joined: Mon Jul 21, 2014 10:11 pm
Location: University of Washington

Re: Phenalenyl with natural-abundance of 13C isotope

Post by Stefan Stoll »

This looks right. We will update the phenalenyl example. Thanks!
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