Hello,
I am trying to simulate Mims ENDOR of 14N and 1H using the function saffron on Easyspin.
As I understand it, the simulated Mims ENDOR spectrum of combined 14N and 1H should be the sum of the simulated spectrum of 14N and the simulated spectrum of 1H. It is not what I observe doing the differents simulations.
Could you tell me if I am doing any mistake?
The program I use for the simulation is the following :
clear all;
close all;
Sys.g = [1.921 1.927 2.054];
Sys.Nucs = '1H,14N';
Sys.A = [2;4];
Sys.Q=[0 0;3.6 0.4];
Sys.lwEndor = 0.3;
Exp.ExciteWidth=1/0.016;
Exp.Range = [0 21];
Exp.Sequence='MimsENDOR';
Exp.nPoints=601;
Exp.Field = 0.3588;
Exp.mwFreq=9.6995e9;
[v_s,spc_s]=saffron(Sys,Exp);
Thank you,
Nolwenn
Mims ENDOR with multiple nuclei
-
- EasySpin Creator
- Posts: 1120
- Joined: Mon Jul 21, 2014 10:11 pm
- Location: University of Washington
Re: Mims ENDOR with multiple nuclei
Which tau value (
Exp.tau
) are you using?Re: Mims ENDOR with multiple nuclei
I am using a Exp.tau of 0.12.
Re: Mims ENDOR with multiple nuclei
Sorry, my program is just completely wrong and not very logic!
But the following should be working (3 protons using MIMS ENDOR)
Sys.S=1/2;
Sys.g = [1.921 1.927 2.054];
Sys.Nucs = '1H,1H,1H';
Sys.A = [-4.1 -4.1 0.4 ; -7.5 -7.5 6.9 ; 9.6 9.6 2.37];
Sys.lwEndor = 0.2;
Exp.ExciteWidth=1/0.016; % pulse of 16 ns
Exp.Range = [9 21]; % between 9 and 21 MHz
Exp.Sequence='MimsENDOR';
Exp.tau=0.120; % tau of 120 ns
Exp.nPoints=601;
Exp.Field = 358.8;
Exp.mwFreq=9.699519;
[v_s,spc_s]=saffron(Sys,Exp);
plot(v_s,spc_s);
Isn't the simulation spectrum supposed to be the sum of individual signal for each proton?
It is not the case for me here. I am wondering if I am doing something wrong or if I don't understand something well?
Thank you,
Nolwenn
But the following should be working (3 protons using MIMS ENDOR)
Sys.S=1/2;
Sys.g = [1.921 1.927 2.054];
Sys.Nucs = '1H,1H,1H';
Sys.A = [-4.1 -4.1 0.4 ; -7.5 -7.5 6.9 ; 9.6 9.6 2.37];
Sys.lwEndor = 0.2;
Exp.ExciteWidth=1/0.016; % pulse of 16 ns
Exp.Range = [9 21]; % between 9 and 21 MHz
Exp.Sequence='MimsENDOR';
Exp.tau=0.120; % tau of 120 ns
Exp.nPoints=601;
Exp.Field = 358.8;
Exp.mwFreq=9.699519;
[v_s,spc_s]=saffron(Sys,Exp);
plot(v_s,spc_s);
Isn't the simulation spectrum supposed to be the sum of individual signal for each proton?
It is not the case for me here. I am wondering if I am doing something wrong or if I don't understand something well?
Thank you,
Nolwenn
-
- EasySpin Creator
- Posts: 1120
- Joined: Mon Jul 21, 2014 10:11 pm
- Location: University of Washington
Re: Mims ENDOR with multiple nuclei
This appears to be a bug. We'll look into this.
Meanwhile, use
Meanwhile, use
Opt.ProductRule = 1
, which works correctly.Re: Mims ENDOR with multiple nuclei
Ok. Thank you very much for your answer.
Nolwenn
Nolwenn
-
- EasySpin Creator
- Posts: 1120
- Joined: Mon Jul 21, 2014 10:11 pm
- Location: University of Washington
Re: Mims ENDOR with multiple nuclei
This bug is fixed in version 5.0.21. It is available on the website.