SimLabel: a GUI to simulate cw EPR from spin labeling

[Alexander Shames]

Dear Emilien! Thank you very much! It works. Great!

[Jeannette.oettrich]

Hello, I have the most recent version of easyspin/simlabel and want to use it to simulate my CW_EPR data. Unfortunately they have a 'spe' format. So I've tried already to transform them with easyspin in a Bruker format (DSC and DAT) however when I load the file afterwards to Simlabel, I've got the followig error message:

No experimental frequency...
Error using plot
Vectors must be the same length.

Error in simlabel/plotspecexp (line 4433)
hspecexp=plot(hspecaxes,Bexp,specexp,'k','linewidth',2);hold(hspecaxes,'on');

Error in simlabel/loadexp (line 714)
plotspecexp(deltaB); %trace spectre exp en tenant compte de deltaB

Error in simlabel/loadexpcllbck (line 656)
loadexp(filename{end},path2exp);%affichage du dernier

Error while evaluating UIControl Callback.


Is there any possibility to fix this problem? Any Ideas?
I would be very glad for your support.
Cheers, Jeannette

[Emilien]

Dear Jeannette,
as indicated by the error message, the frequency is missing. So just add it when creating your DSC and DTA as indicated in the documentation.
Emilien

[Emilien]

An updated version is available*!
Just replace the previous files...

SimLabel_Sept2019.zip

(1.27 MiB) Downloaded 2535 times

What's new:
- bugs in comparison of experimental spectra fixed,
- several bugs in multifit mode fixed,
- bugs with Matlab 2014b fixed.

Suscribe this topic at the bottom of this page to be aware of new version!

More details on SimLabel (how it works, available features,..):

1. in the documentation (by clicking "?" on the SimLabel main panel),
2. in the following publication: Etienne at al, 2017, Magnetic Resonance in Chemistry, DOI: 10.1002/mrc.4578 (http://dx.doi.org/10.1002/mrc.4578)

*If you use some results obtained with the help of SimLabel in any scientific publication, please cite the paper above and Stoll et al, J. Magn. Reson. 178(1), 42-55 (2006).

[snowflake]

Dear Maciej,
How did you solve the problems you met by launching simlabel, would you please share the solution with me? I met the same one.
Great appreciation！
Dan

Unfortunately, I have no permission to write private messages yet. Not sure when I will be able to do so.

Here, I give some examples of errors:


1. After running SimLabel by writing 'simlabel' in command line, GUI appears, however with an error:

Error using ==
Matrix dimensions must agree.

Error in simlabel (line 328)
halltoolbar(halltoolbar==hzoomin)=[];%supprime 1 handle a conserver


2. After clicking 'load exp':

Error in simlabel/loadexpcllbck (line 642)
cd(path2keep);

Error while evaluating UIControl Callback.


3. When clicking 'add new component':

Error in simlabel/addcomponent (line 2165)
hfig=opencomponentwin; % ouverture d'une nouvelle fenetre de composante
SimLabel_X

Error while evaluating UIControl Callback.

[Emilien]

Dear Dan,
Try first the latest SimLabel release (Sept 2019)...
Thanks.
Emilien

[gggabimandl]

Hi!

I am using Matlab R2019b and when I run simlabel, and usually if i try to add an A2 parameter, I get an error in Matlab that says "Error in simlabel/cllbckeditA (line 4016)
runsimul(hobject)

Error while evaluating UIControl Callback.
" and then the entire thing freezes and I have to end Matlab in task manager and start over. Not sure if there is anything that I am doing wrong, or if this can be fixed?


Thanks,
Gabi

[Emilien]

Dear Gabi,
Unfortunately I can not reproduce your problem. Can you confirm you are using the latest release? (over the "?" button...).
Can you attach a screenshot of your simulation with all parameters, and copy the entire error message?
Tanks,
Emilien

[Emilien]

An updated version is available*!
Just replace the previous files...

SimLabel_Sept2020.zip

(1.27 MiB) Downloaded 2502 times

What's new:
- bugs depending on Matlab release fixed,
- bugs when starting esfit with several components, some with hyperfine coupling, others without.

Suscribe this topic at the bottom of this page to be aware of new version!

More details on SimLabel (how it works, available features,..):

1. in the documentation (by clicking "?" on the SimLabel main panel),
2. in the following publication: Etienne at al, 2017, Magnetic Resonance in Chemistry, DOI: 10.1002/mrc.4578 (http://dx.doi.org/10.1002/mrc.4578)

*If you use some results obtained with the help of SimLabel in any scientific publication, please cite the paper above and Stoll et al, J. Magn. Reson. 178(1), 42-55 (2006).

[Emilien]

At the moment, SimLabel can not be used with EasySpin 6.0.0.