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How to read property.text file using orca2easyspin;hydroxyl spectrum
Posted: Mon Nov 07, 2022 12:50 am
by lulunulibiye
Hi all,
I am a beginner of easyspin and matlab and wouid like to ask for your help with the difficulties that I am facing.orca5.0.3 calculates the EPR and generates the property.text file, but the property.text file cannot be read by using orca2easyspin, and matlab prompts that orca2easyspin is used incorrectly. The following are screenshots and input and output files. How to extract the property.text file using orca2easyspin, or is there any way to convert it into a prop file?
Hydroxyl is an example of the easyspin website Importing EPR parameters from ORCA document. Which experiment can the hydroxyl spectrum match with, and which textbook theory can be used to explain this spectrum? I think each peak of this spectrum can be better understood through experiments and theory.
Thanks
Regards,
Lu
Re: How to read property.text file using orca2easyspin;hydroxyl spectrum
Posted: Tue Nov 08, 2022 11:03 am
by Stefan Stoll
You might be in the wrong folder. Type pwd
at the command prompt to see which folder you are in.
Re: How to read property.text file using orca2easyspin;hydroxyl spectrum
Posted: Wed Nov 09, 2022 7:08 pm
by lulunulibiye
Thanks for the rapid reply.
I should be in the correct folder EPRtest that contains the property.txt file. Entering pwd showed the correct EPRtest folder. The folder above MATLAB and the current folder below both contain property.txt file.How should I solve it?
Re: How to read property.text file using orca2easyspin;hydroxyl spectrum
Posted: Fri Nov 11, 2022 9:10 am
by DanielKlose
Hi!
I just tried on your example rerun with Orca 5.0.3 and with EasySpin 6.0.0-dev.48:
in Matlab, executed in the folder where the files are located:
Sys = orca2easyspin('hydroxyl.out');
Sys2 = orca2easyspin('hydroxyl_property.txt');
Both commands returned a valid spin system. Do you use the same EasySpin version?
Best wishes!
Re: How to read property.text file using orca2easyspin;hydroxyl spectrum
Posted: Tue Nov 15, 2022 9:26 am
by Matt Krzyaniak
If there is some sort of pathing issue you could try:
Code: Select all
[filename,pathname] = uigetfile('*.*');
Sys = orca2easyspin(fullfile(pathname,filename));
Re: How to read property.text file using orca2easyspin;hydroxyl spectrum
Posted: Mon Feb 13, 2023 5:31 am
by lulunulibiye
Thank you for your reply. It is the problem of the version of easyspin I downloaded that makes it impossible to read the property.text file. Now the problem has been solved by using easyspin6.0.0, thank you again