19F HFS
Posted: Mon Oct 14, 2019 11:10 am
Dear Stefan,
I use your program EasySpin to simulate the rotational ESR spectra of TEMPO in different environment. The software works pretty well, however lately I got problem with simulation the one spectrum (please see attached file). I believe that in addition to the slow motional spectrum from TEMPO, the electron interact with 19F and that HFS is anisotropic. So I tried to write scrip including such interaction but I am not sure I am doing this correctly. Could you give me some advices how to write the correct script? Thank you in advance.
Sincerely,
KK
1 script
% slow-motional cw EPR spectrum simulation of a nitroxide radical
%==========================================================================
% bestvalues: [-4.9398 5 15.5461 97.4956 0.4000 0.3596 2.0085 2.0055 2.0013]
clear, clf
[exp,spc] = eprload('d:\data\pw\bud385_F_l-LN-KK4-bl.DTA'); % Bruker BES3T
% Parameters
% S
S.g = [2.0085 2.0055 2.0013];
S.Nucs = '14N';
S.A = [5 15.5461 97.4956];
% S - Dynamic parameters
S.lwpp = [0.4000 0.3596];
S.logtcorr = -4.9398;
HFS = struct('g',[2.0085 2.0055 2.0013],'Nucs','14N,19F');
AF = [800 800 2000];
HFS.A = [5 15.5461 97.4956; AF];
HFS.logtcorr = -7;
HFS.lwpp = [2 1];
% Experimental parameters
Exp.mwFreq = 9.363302;
Exp.Range = [285, 385];
Exp.nPoints = 2048;
% Next, we specify which parameter we want to be fitted
% and by how much the fitting algorithm can vary it approximately.
Vary1.logtcorr = 2
Vary1.A = [5 5 5];
Vary1.lwpp = [0.2 0.2];
Vary1.g = [0.0005 0.0005 0.0005];
Vary2.lwpp = [0.2 0.2];
Opt.Verbosity = 1;
SimOpt.Method = 'perturb';
% Calling the fitting function
FitOpt.Method = 'simplex fcn'; % simplex algorithm, normal spectra;
esfit('chili',spc,{S, HFS},{Vary1, Vary2},Exp,SimOpt,FitOpt);
2 script
% slow-motional cw EPR spectrum simulation of a nitroxide radical
%==========================================================================
% bestvalues: [-4.9398 5 15.5461 97.4956 0.4000 0.3596 2.0085 2.0055 2.0013]
clear, clf
[exp,spc] = eprload('d:\data\pw\bud385_F_l-LN-KK4-bl.DTA'); % Bruker BES3T
% Parameters
% S
S.g = [2.0085 2.0055 2.0013];
S.Nucs = '14N';
S.A = [5 15.5461 97.4956];
% S - Dynamic parameters
S.lwpp = [0.4000 0.3596];
S.logtcorr = -4.9398;
HFS = struct('g',[2.0085 2.0055 2.0013],'Nucs','14N,19F');
AF = [800 800 2000];
HFS.A = [5 15.5461 97.4956; AF];
HFS.logtcorr = -7;
HFS.lwpp = [2 1];
% Experimental parameters
Exp.mwFreq = 9.363302;
Exp.Range = [285, 385];
Exp.nPoints = 2048;
% Next, we specify which parameter we want to be fitted
% and by how much the fitting algorithm can vary it approximately.
Vary1.logtcorr = 2
Vary1.A = [5 5 5];
Vary1.lwpp = [0.2 0.2];
Vary1.g = [0.0005 0.0005 0.0005];
Vary2.lwpp = [0.2 0.2];
Opt.Verbosity = 1;
SimOpt.Method = 'perturb';
% Calling the fitting function
FitOpt.Method = 'simplex fcn'; % simplex algorithm, normal spectra;
esfit('chili',spc,{S, HFS},{Vary1, Vary2},Exp,SimOpt,FitOpt);
I use your program EasySpin to simulate the rotational ESR spectra of TEMPO in different environment. The software works pretty well, however lately I got problem with simulation the one spectrum (please see attached file). I believe that in addition to the slow motional spectrum from TEMPO, the electron interact with 19F and that HFS is anisotropic. So I tried to write scrip including such interaction but I am not sure I am doing this correctly. Could you give me some advices how to write the correct script? Thank you in advance.
Sincerely,
KK
1 script
% slow-motional cw EPR spectrum simulation of a nitroxide radical
%==========================================================================
% bestvalues: [-4.9398 5 15.5461 97.4956 0.4000 0.3596 2.0085 2.0055 2.0013]
clear, clf
[exp,spc] = eprload('d:\data\pw\bud385_F_l-LN-KK4-bl.DTA'); % Bruker BES3T
% Parameters
% S
S.g = [2.0085 2.0055 2.0013];
S.Nucs = '14N';
S.A = [5 15.5461 97.4956];
% S - Dynamic parameters
S.lwpp = [0.4000 0.3596];
S.logtcorr = -4.9398;
HFS = struct('g',[2.0085 2.0055 2.0013],'Nucs','14N,19F');
AF = [800 800 2000];
HFS.A = [5 15.5461 97.4956; AF];
HFS.logtcorr = -7;
HFS.lwpp = [2 1];
% Experimental parameters
Exp.mwFreq = 9.363302;
Exp.Range = [285, 385];
Exp.nPoints = 2048;
% Next, we specify which parameter we want to be fitted
% and by how much the fitting algorithm can vary it approximately.
Vary1.logtcorr = 2
Vary1.A = [5 5 5];
Vary1.lwpp = [0.2 0.2];
Vary1.g = [0.0005 0.0005 0.0005];
Vary2.lwpp = [0.2 0.2];
Opt.Verbosity = 1;
SimOpt.Method = 'perturb';
% Calling the fitting function
FitOpt.Method = 'simplex fcn'; % simplex algorithm, normal spectra;
esfit('chili',spc,{S, HFS},{Vary1, Vary2},Exp,SimOpt,FitOpt);
2 script
% slow-motional cw EPR spectrum simulation of a nitroxide radical
%==========================================================================
% bestvalues: [-4.9398 5 15.5461 97.4956 0.4000 0.3596 2.0085 2.0055 2.0013]
clear, clf
[exp,spc] = eprload('d:\data\pw\bud385_F_l-LN-KK4-bl.DTA'); % Bruker BES3T
% Parameters
% S
S.g = [2.0085 2.0055 2.0013];
S.Nucs = '14N';
S.A = [5 15.5461 97.4956];
% S - Dynamic parameters
S.lwpp = [0.4000 0.3596];
S.logtcorr = -4.9398;
HFS = struct('g',[2.0085 2.0055 2.0013],'Nucs','14N,19F');
AF = [800 800 2000];
HFS.A = [5 15.5461 97.4956; AF];
HFS.logtcorr = -7;
HFS.lwpp = [2 1];
% Experimental parameters
Exp.mwFreq = 9.363302;
Exp.Range = [285, 385];
Exp.nPoints = 2048;
% Next, we specify which parameter we want to be fitted
% and by how much the fitting algorithm can vary it approximately.
Vary1.logtcorr = 2
Vary1.A = [5 5 5];
Vary1.lwpp = [0.2 0.2];
Vary1.g = [0.0005 0.0005 0.0005];
Vary2.lwpp = [0.2 0.2];
Opt.Verbosity = 1;
SimOpt.Method = 'perturb';
% Calling the fitting function
FitOpt.Method = 'simplex fcn'; % simplex algorithm, normal spectra;
esfit('chili',spc,{S, HFS},{Vary1, Vary2},Exp,SimOpt,FitOpt);