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Mims ENDOR with multiple nuclei

Posted: Wed Oct 14, 2015 9:38 am
by Nolwenn
Hello,

I am trying to simulate Mims ENDOR of 14N and 1H using the function saffron on Easyspin.

As I understand it, the simulated Mims ENDOR spectrum of combined 14N and 1H should be the sum of the simulated spectrum of 14N and the simulated spectrum of 1H. It is not what I observe doing the differents simulations.
Could you tell me if I am doing any mistake?

The program I use for the simulation is the following :

clear all;
close all;

Sys.g = [1.921 1.927 2.054];
Sys.Nucs = '1H,14N';
Sys.A = [2;4];
Sys.Q=[0 0;3.6 0.4];
Sys.lwEndor = 0.3;

Exp.ExciteWidth=1/0.016;
Exp.Range = [0 21];
Exp.Sequence='MimsENDOR';
Exp.nPoints=601;
Exp.Field = 0.3588;
Exp.mwFreq=9.6995e9;

[v_s,spc_s]=saffron(Sys,Exp);

Thank you,
Nolwenn

Re: Mims ENDOR with multiple nuclei

Posted: Wed Oct 14, 2015 1:56 pm
by Stefan Stoll
Which tau value (Exp.tau) are you using?

Re: Mims ENDOR with multiple nuclei

Posted: Thu Oct 15, 2015 1:54 am
by Nolwenn
I am using a Exp.tau of 0.12.

Re: Mims ENDOR with multiple nuclei

Posted: Mon Oct 19, 2015 7:50 am
by Nolwenn
Sorry, my program is just completely wrong and not very logic! :oops:

But the following should be working (3 protons using MIMS ENDOR)

Sys.S=1/2;
Sys.g = [1.921 1.927 2.054];
Sys.Nucs = '1H,1H,1H';
Sys.A = [-4.1 -4.1 0.4 ; -7.5 -7.5 6.9 ; 9.6 9.6 2.37];
Sys.lwEndor = 0.2;

Exp.ExciteWidth=1/0.016; % pulse of 16 ns
Exp.Range = [9 21]; % between 9 and 21 MHz
Exp.Sequence='MimsENDOR';
Exp.tau=0.120; % tau of 120 ns
Exp.nPoints=601;
Exp.Field = 358.8;
Exp.mwFreq=9.699519;

[v_s,spc_s]=saffron(Sys,Exp);
plot(v_s,spc_s);

Isn't the simulation spectrum supposed to be the sum of individual signal for each proton?
It is not the case for me here. I am wondering if I am doing something wrong or if I don't understand something well?

Thank you,
Nolwenn

Re: Mims ENDOR with multiple nuclei

Posted: Mon Oct 19, 2015 8:31 am
by Stefan Stoll
This appears to be a bug. We'll look into this.

Meanwhile, use Opt.ProductRule = 1, which works correctly.

Re: Mims ENDOR with multiple nuclei

Posted: Tue Oct 20, 2015 3:50 am
by Nolwenn
Ok. Thank you very much for your answer.
Nolwenn

Re: Mims ENDOR with multiple nuclei

Posted: Fri Apr 29, 2016 11:01 pm
by Stefan Stoll
This bug is fixed in version 5.0.21. It is available on the website.