single crystal orientation
Posted: Wed Sep 16, 2015 12:40 am
I found this forum rather helpful when seeking solutions to some problems in using ES.
I am dealing with a hexagonal single crystal (space group No 176) along c and a/b directions using EPR. To further simulate the spectra, I have to state the crystal orientation to other coordinate frames in the code.
According to the manual, for lab frame, zL is along the static magnetic field. For crystal frame zC is along the six-fold axis, that is the c axis in my case while xC and yC are arbitrary.
If the spectrum is collected along the c axis, i think the code below would work.
Exp.CrystalSymmetry = 'P63/m'; % space group symbol
Exp.CrystalSymmetry = 176; % space group number 176
Exp.CrystalOrientation = [0 0 0] *pi/180 ; %angles for lab frame to crystal frame
If the data come from the observation along the a axis, it seems not possible to have the crystal frame overlapped with the lab frame because a and b are not perpendicular to each other in the hexagonal system.
For instance, a axis can be overlapped by y is not.
Exp.CrystalOrientation = [0 90 30] *pi/180 ; %angles for lab frame to crystal frame
Can you suggest me how to deal with this problem. Thank you.
Tony
I am dealing with a hexagonal single crystal (space group No 176) along c and a/b directions using EPR. To further simulate the spectra, I have to state the crystal orientation to other coordinate frames in the code.
According to the manual, for lab frame, zL is along the static magnetic field. For crystal frame zC is along the six-fold axis, that is the c axis in my case while xC and yC are arbitrary.
If the spectrum is collected along the c axis, i think the code below would work.
Exp.CrystalSymmetry = 'P63/m'; % space group symbol
Exp.CrystalSymmetry = 176; % space group number 176
Exp.CrystalOrientation = [0 0 0] *pi/180 ; %angles for lab frame to crystal frame
If the data come from the observation along the a axis, it seems not possible to have the crystal frame overlapped with the lab frame because a and b are not perpendicular to each other in the hexagonal system.
For instance, a axis can be overlapped by y is not.
Exp.CrystalOrientation = [0 90 30] *pi/180 ; %angles for lab frame to crystal frame
Can you suggest me how to deal with this problem. Thank you.
Tony