SimLabel: a GUI to simulate cw EPR from spin labeling

Programs, scripts and GUIs shared by EasySpin users
Given
Newbie
Posts: 3
Joined: Fri May 05, 2017 6:53 am

Re: SimLabel: a GUI to simulate cw EPR from spin labeling

Post by Given »

Can I use it for the system with a spin S>1/2 ?

Thanks,
Given
Emilien
Resident User
Posts: 58
Joined: Mon Apr 20, 2015 12:13 am

Re: SimLabel: a GUI to simulate cw EPR from spin labeling

Post by Emilien »

Hi Given,
sorry for the delay...
As specified in the documentation, SimLabel provides an easy way to visualize, simulate and fit cw EPR spectra, with S=1/2 and small g anisotropy (because of Gaussian, Lorentzian or Voigtian broadenings), considering one or two hyperfine couplings, in the slow‐motion regime as well as in the solid state.
A GUI is easy to use but provide less opportunity than coding...
Emilien
Emilien
Resident User
Posts: 58
Joined: Mon Apr 20, 2015 12:13 am

Re: SimLabel: a GUI to simulate cw EPR from spin labeling

Post by Emilien »

An updated version is available! Some minor bugs were fixed.
Just replace the previous files...
SimLabel_Aug2017.zip
(982.42 KiB) Downloaded 1799 times
Emilien ETIENNE

More details on SimLabel in the following publication:
Etienne at al, 2017, Magnetic Resnance in Chemistry, DOI: 10.1002/mrc.4578 (http://dx.doi.org/10.1002/mrc.4578)
If you use results obtained with the help of SimLabel in any scientific publication, please cite this paper and Stoll et al, J. Magn. Reson. 178(1), 42-55 (2006).
Emilien
Resident User
Posts: 58
Joined: Mon Apr 20, 2015 12:13 am

Re: SimLabel: a GUI to simulate cw EPR from spin labeling

Post by Emilien »

An updated version is available! Some minor bugs were fixed.
Just replace the previous files...
SimLabel_Sept2017.zip
(982.48 KiB) Downloaded 1812 times
Emilien ETIENNE

More details on SimLabel in the following publication:
Etienne at al, 2017, Magnetic Resnance in Chemistry, DOI: 10.1002/mrc.4578 (http://dx.doi.org/10.1002/mrc.4578)
If you use results obtained with the help of SimLabel in any scientific publication, please cite this paper and Stoll et al, J. Magn. Reson. 178(1), 42-55 (2006).
Emilien
Resident User
Posts: 58
Joined: Mon Apr 20, 2015 12:13 am

Re: SimLabel: a GUI to simulate cw EPR from spin labeling

Post by Emilien »

An updated version is available!
Just replace the previous files...
SimLabel_jan2018.zip
(1.2 MiB) Downloaded 1818 times
What's new:
-A Multi Fit mode is now available for fitting several spectra from the same sample in the same time.
-SimLabel notifies the user when the fitting procedure results in a parameter value equal to the lower or the upper limit of the variation range.
-Magnettech spectra can be loaded.

Suscribe this topic at the bottom of this page to be aware of new version!

More details on SimLabel in the following publication:
Etienne at al, 2017, Magnetic Resnance in Chemistry, DOI: 10.1002/mrc.4578 (http://dx.doi.org/10.1002/mrc.4578)
If you use results obtained with the help of SimLabel in any scientific publication, please cite this paper and Stoll et al, J. Magn. Reson. 178(1), 42-55 (2006).
Emilien
Resident User
Posts: 58
Joined: Mon Apr 20, 2015 12:13 am

Re: SimLabel: a GUI to simulate cw EPR from spin labeling

Post by Emilien »

An updated version is available!
Just replace the previous files...
SimLabel_Sept2018.zip
(1.27 MiB) Downloaded 1765 times
What's new:
- some minor bugs were fixed.
- some minor improvements.
- lw=[0,0] now possible.
- updated documentation.


Suscribe this topic at the bottom of this page to be aware of new version!

More details on SimLabel in the following publication:
Etienne at al, 2017, Magnetic Resnance in Chemistry, DOI: 10.1002/mrc.4578 (http://dx.doi.org/10.1002/mrc.4578)
If you use results obtained with the help of SimLabel in any scientific publication, please cite this paper and Stoll et al, J. Magn. Reson. 178(1), 42-55 (2006).
Emilien
Resident User
Posts: 58
Joined: Mon Apr 20, 2015 12:13 am

Re: SimLabel: a GUI to simulate cw EPR from spin labeling

Post by Emilien »

WARNING! At the moment, SimLabel does not run on Matlab R2018b but should run on any previous Matlab release...
anibhandari.91
Newbie
Posts: 7
Joined: Sat Aug 19, 2017 11:30 am

Re: SimLabel: a GUI to simulate cw EPR from spin labeling

Post by anibhandari.91 »

When i have try to load experimental spectrum in .xml file format the following messages are coming up in matlab window and spectrum did not loaded. How can I solve this problem???
Thank you



No experimental frequency...
Error using plot
Vectors must be the same length.

Error in simlabel/plotspecexp (line 4346)
hspecexp=plot(hspecaxes,Bexp,specexp,'k','linewidth',2);hold(hspecaxes,'on');

Error in simlabel/loadexp (line 692)
plotspecexp(deltaB); %trace spectre exp en tenant compte de deltaB

Error in simlabel/loadexpcllbck (line 641)
loadexp(filename{end},path2exp);%affichage du dernier

Error while evaluating UIControl Callback
Emilien
Resident User
Posts: 58
Joined: Mon Apr 20, 2015 12:13 am

Re: SimLabel: a GUI to simulate cw EPR from spin labeling

Post by Emilien »

@anibhandari.91:
Hi, to solve your problem without waiting for the next release, search the following code in the simlabel.m file

Code: Select all

    elseif isfield(param,'Measurement_MwFreq')
        expfreq=param.Measurement_MwFreq; %en GHz from Magnettech
        Bexpinit=B;% B et Bexpinit en mT
    else
and replace by

Code: Select all

    elseif isfield(param,'MwFreq')
        expfreq=param.MwFreq; %en GHz from Magnettech
        Bexpinit=B;% B et Bexpinit en mT
    else
anibhandari.91
Newbie
Posts: 7
Joined: Sat Aug 19, 2017 11:30 am

Re: SimLabel: a GUI to simulate cw EPR from spin labeling

Post by anibhandari.91 »

Thank you. It is working.
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